Welcome to the Maguire Lab

We are a research group jointly based in Dalhousie’s Faculty of Computer Science and the Faculty of Medicine’s Department of Community Health & Epidemiology.

Our aim is to develop and collaboratively apply data-driven methods to try and mitigate health and social crises. This is focused on two main areas: genomic epidemiology of infectious diseases and inter-disciplinary collaborations with domain experts

Specifically, this former work involves developing and applying novel microbial bioinformatics and machine learning approaches to better understand the diagnosis, evolution, and dynamics of infectious diseases. We largely work on problems related to antimicrobial resistance (AMR) and, in the last couple of years, the COVID-19 pandemic with national and international consortia of clinicians and public health experts. Whereas, our broader collaborative data science works includes work exploring online radicalisation with sociologists, patient preference at refugee clinics, and autism-related language-use.

For more details about specific projects, collaborators, and funding sources see Research).

We are located in Dalhousie University and have strong ties to the Shared Hospital Lab located at Sunnybrook Health Sciences Centre, the CARD, the Canadian Food Inspection Agency, and the Public Health Agency of Canada. This also includes national and international public health consortia such as IRIDA, CanCOGeN, and PHA4GE.

Joining the Lab

We are looking for new enthusiastic and creative PhD students to join the team!

Funding

We are grateful for funding from Dalhousie University, CIHR, NSERC, CANMOD, Genome Canada, SSHRC, and (via PHA4GE) the BMGF.

News

8 July 2026

Ash Porter, David Mahoney, Bonface Onyango were all selected to give oral presentations (with Precious Osadebamwen presenting a poster) at ZAMBI

7 July 2026

Deanna Tait was selected to give an extended oral presentation on their Avian Influenza GWAS work at ZAMBI

6 July 2026

We organised a new national ~160 person Zoonosis, AMR, and Bioinformatics conference: ZAMBI

4 June 2026

Angela McLaughlin presented her work on HPAI genotyping systems at 33rd International Dynamics & Evolution of Human Viruses and Canadian Society of Virology meetings

28 April 2026

Gustavo Sganzerla Martinez’s paper on mpox clade prediction was posted as a preprint on medRxiv

10 April 2026

Work led by Lauren Crawshaw and Jeff Bowman on trying to find and characterise whether B.1.641 had formed a reservoir in wild deer was published in FACETS

23 March 2026

David Mahoney presented his work on SubGraphia at the AMR: Genomics, Big Data, and Emerging Techologies at thew Wellcome Genome Campus

5 March 2026

Work led by the Brinkman lab characterising AMR mobility patterns across 8000 bacterial species was released on BioRxiv

15 February 2026

Clayton Hall’s paper (supervised by Xena Li) evaluating genotype-phenotype correlation in beta-lactam/beta-lactamase inhibitor pairs in Pseudomonas was published in JID

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